Seq Repository

March 2024:

• Renan RefSeq is available for BLAST (open access).

February 2024:

• Renan RefSeq assembly and annotations are available for download.
• IWGSC RefSeq v2.1 functional annotation and all correspondances between v1.0, v1.1, v2.1 and survey sequence are available for download .

November 2023:

• The Wheat Genome Book is out and available in open access (IWGSC announcement ).

October 2023:

• Projection of 2.8M SNPs from IWGSC RefSeq v1.0 onto v2.1 available .

February 2022:

• Data from the reference sequence of the Turkish elite cultivar Sonmez are now available to download (IWGSC news ).

April 2021:

• IWGSC RefSeq v2.1 assembly and annotation is available in open access to download, BLAST and display in a browser (IWGSC announcement ).

July 2020:

• Chromatin accessibility data are available in open access (E. Akhunov).

August 2019:

• IWGSC RefSeq v2.0 assembly is now available for BLAST (under IWGSC General data access agreement ).
• Durum wheat Svevo has been also added to the BLAST (in open access ).

July 2019:

• Version 2 of the reference sequence of bread wheat, IWGSC RefSeq v2.0 assembly, is now available to download (under IWGSC General data access agreement , IWGSC announcement ).

• New data available on download and display : 1000 wheat exomes (E. Akhunov).

Feb 2019:

• New data available on download and display : GBS SNP calls, 280k markers from the BreedWheat project, tRNA data.

August 2018:

• The Wheat Code is Finally Craked (IWGSC announcement ).
• Science article "Shifting the limits in wheat research and breeding using a fully annotated reference genome".
• Genome Biology companion paper "Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data".

July 2018:

• All IWGSC reference sequence v1.0 resources now publicly available at URGI (official announcement )

July 2017:

• The IWGSC RefSeq v1.0 browser is now available (under IWGSC General data access agreement ).

May 2017:

• The IWGSC RefSeq v1.0 annotation is now available for download (under IWGSC General data access agreement ).

Jan 2017:

• The IWGSC RefSeq v1.0 assembly is now available for download and BLAST (under IWGSC General data access agreement ).

June 2016:

• The IWGSC WGA v0.4 (Illumina short sequence reads assembled with NRGene’s DeNovoMAGIC^TM software) is available to BLAST and download (under IWGSC General data access agreement ).

May 2016:

• 3AL, 3AS v2 and 3DS v2 physical maps are available to display (under IWGSC Project data access agreement ).

April 2016:

• TGACv1 assembly is publicly available for download at EnsemblPlants and in our BLAST .

Jan 2016:

• IWGSC survey sequence version 3 assembly (A. Sharpe, D. Konkin and C. Pozniak) is available for download and in a browser (under IWGSC General data access agreement ).

Dec 2015:

• It is now possible to order BAC clones at INRA CNRGV via the new BAC Libraries tab or the physical map browser .

• 7DL physical map is available for IWGSC project team at the moment.
• Genetic maps data are downloadable with marker names, sequences and positions when available.

Nov 2015:

• Physical maps for chromosome arms 2BS , 2BL , 2DS , 2DL , 4BS , 4BL , 5BL , and 5DL are publicly available (thanks to Bayer CropScience). Read the IWGSC news .
• RNA-Seq meiosis data (4 conditions in duplicate) are publicly available to download .

Oct 2015:

• All the SRS wheat databanks are now available on URGI BLAST with advanced functionalities. SRS BLAST is no longer available.

Sept 2015:

• In addition of the GBrowse , we set up a JBrowse to display the annotated 3B reference sequence (public access).
• 6B v2 physical map published by Kobayashi et al. is publicly available.
• 5DS physical map published by Akpinar et al . is publicly available.
• The IWGSC public Blast at URGI has been updated with news functionalities: addition of a "download all" button, link from the matching contigs to the browsers (zoomed in the region) and link to EnsemblPlants chromosomes.

May 2015:

• New physical maps available to display : 3AS , 5AL , 5AS , 7AL , 7AS , 1D , 4D and 6D  physical maps are now available. The 1AL physical map is now publicly available.

Feb 2015:

• Variations discovered by GBS and WEC (Akhunov) available for download.

Jan 2015:

• New physical maps available to display : 2A, 4A, 7B and 7DS.
• Wheat3BMine , a data warehouse dedicated to wheat chr. 3B is available.
• New bank available to BLAST : 4A individual chr shotgun.

Sept 2014:

• Aegilops tauschii scaffolds available for BLAST at ATGSP .
• Summary of the different CSS assemblies and versions: IWGSC-CSS_assembly-version-overview_Sep2014.xls

August 2014:

• IWGSC survey sequence browser is now publicly available.
• New version of the survey sequence gene models (v2.2 July 2014) is publicly available.

June 2014:

Other wheat species WGS assemblies are publicly available for BLAST : Triticum durum, cv. Cappelli, Triticum durum, cv. Strongfield, Triticum monococcum, Aegilops speltoides, Aegilops sharonensis,Triticum urartu, Aegilops tauschii.

April 2014:

• Access Status webpage is available to display all the resources and their access (public, community, etc.).
• 3B reference sequence databanks (whole chromosome and CDS only) are available to BLAST .

March 2014:

• Public BLAST to query survey sequence and 454 assemblies is available .
• 3B data (Genomic DNA, CDSs, annotation of features and a README) are publicly available for download .
• POPSEQ data are publicly available for download .
• GenomeZipper data are now publicly available.
• New oriented RNA-Seq library is publicly available.

Feb 2014:

• Genome Zipper  v5 is available for coordinating committee members.
• Diploid wheat species WGS assemblies are publicly  available for download

Jan 2014:

• Survey sequence assemblies and Gene models download are publicly available.
• 3B annotated pseudomolecule is publicly available.
• 2D physical map (WGP data) is publicly available to download .
• 3B RNA-Seq data (15 conditions) are publicly available to download .

Dec 2013:

• New Gene models version is available for coordinating committee members.

Oct 2013:

• 7B physical map data (Odd-Arne Olsen) are available upon request though an MTA.

Sept 2013:

• Chromosomes assemblies are now available for download to "Blast agreement" members.

• Other wheat species WGS assemblies (TGAC) download are available to IWGSC coordinating committee members.

Jul 2013:

• RNA-Seq data from INRA GDEC (E. Paux) are available to coordinating committee members.
• 1AS sequence model (T. Wicker) is available for download.

Jun 2013:

• Genome Zipper v4.2 is available for coordinating committee members with new version of the 3D, 5D, 6D, 7D and 6BL zipper chromosomes.

May 2013:

• New assemblies available for download: 4AL v2 and 4DL v3 .
• These assemblies are available for BLAST.

Apr 2013:

• Genome Zipper v4 is available for coordinating committee members.

Feb 2013:

• Gene models are available for coordinating committee members.

Jan 2013:

• Genome Zipper v3 is available for coordinating committee members.
• The BLAST demo video is now available.