News
March 2024:
- Renan RefSeq is available for BLAST (open access).
February 2024:
- Renan RefSeq assembly and annotations are available for download.
- IWGSC RefSeq v2.1 functional annotation and all correspondances between v1.0, v1.1, v2.1 and survey sequence are available for download .
November 2023:
- The Wheat Genome Book is out and available in open access (IWGSC announcement ).
October 2023:
- Projection of 2.8M SNPs from IWGSC RefSeq v1.0 onto v2.1 available .
February 2022:
- Data from the reference sequence of the Turkish elite cultivar Sonmez are now available to download (IWGSC news ).
April 2021:
- IWGSC RefSeq v2.1 assembly and annotation is available in open access to download, BLAST and display in a browser (IWGSC announcement ).
July 2020:
- Chromatin accessibility data are available in open access (E. Akhunov).
August 2019:
- IWGSC RefSeq v2.0 assembly is now available for BLAST (under IWGSC General data access agreement ).
- Durum wheat Svevo has been also added to the BLAST (in open access ).
July 2019:
- Version 2 of the reference sequence of bread wheat, IWGSC RefSeq v2.0 assembly, is now available to download (under IWGSC General data access agreement , IWGSC announcement ).
Feb 2019:
- New data available on download and display : GBS SNP calls, 280k markers from the BreedWheat project, tRNA data.
August 2018:
- The Wheat Code is Finally Craked (IWGSC announcement ).
- Science article "Shifting the limits in wheat research and breeding using a fully annotated reference genome".
- Genome Biology companion paper "Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data".
July 2018:
- All IWGSC reference sequence v1.0 resources now publicly available at URGI (official announcement )
July 2017:
- The IWGSC RefSeq v1.0 browser is now available (under IWGSC General data access agreement ).
May 2017:
- The IWGSC RefSeq v1.0 annotation is now available for download (under IWGSC General data access agreement ).
Jan 2017:
- The IWGSC RefSeq v1.0 assembly is now available for download and BLAST (under IWGSC General data access agreement ).
June 2016:
- The IWGSC WGA v0.4 (Illumina short sequence reads assembled with NRGeneās DeNovoMAGICTM software) is available to BLAST and download (under IWGSC General data access agreement ).
May 2016:
- 3AL, 3AS v2 and 3DS v2 physical maps are available to display (under IWGSC Project data access agreement ).
April 2016:
- TGACv1 assembly is publicly available for download at EnsemblPlants and in our BLAST .
Jan 2016:
- IWGSC survey sequence version 3 assembly (A. Sharpe, D. Konkin and C. Pozniak) is available for download and in a browser (under IWGSC General data access agreement ).
Dec 2015:
- It is now possible to order BAC clones at INRA CNRGV via the new BAC Libraries tab or the physical map browser .
- 7DL physical map is available for IWGSC project team at the moment.
- Genetic maps data are downloadable with marker names, sequences and positions when available.
Nov 2015:
- Physical maps for chromosome arms 2BS , 2BL , 2DS , 2DL , 4BS , 4BL , 5BL , and 5DL are publicly available (thanks to Bayer CropScience). Read the IWGSC news .
- RNA-Seq meiosis data (4 conditions in duplicate) are publicly available to download .
Oct 2015:
- All the SRS wheat databanks are now available on URGI BLAST with advanced functionalities. SRS BLAST is no longer available.
Sept 2015:
- In addition of the GBrowse , we set up a JBrowse to display the annotated 3B reference sequence (public access).
- 6B v2 physical map published by Kobayashi et al. is publicly available.
- 5DS physical map published by Akpinar et al . is publicly available.
- The IWGSC public Blast at URGI has been updated with news functionalities: addition of a "download all" button, link from the matching contigs to the browsers (zoomed in the region) and link to EnsemblPlants chromosomes.
May 2015:
- New physical maps available to display : 3AS , 5AL , 5AS , 7AL , 7AS , 1D , 4D and 6D physical maps are now available. The 1AL physical map is now publicly available.
Feb 2015:
- Variations discovered by GBS and WEC (Akhunov) available for download.
Jan 2015:
- New physical maps available to display : 2A, 4A, 7B and 7DS.
- Wheat3BMine , a data warehouse dedicated to wheat chr. 3B is available.
- New bank available to BLAST : 4A individual chr shotgun.
Sept 2014:
- Aegilops tauschii scaffolds available for BLAST at ATGSP .
- Summary of the different CSS assemblies and versions: IWGSC-CSS_assembly-version-overview_Sep2014.xls
August 2014:
- IWGSC survey sequence browser is now publicly available.
- New version of the survey sequence gene models (v2.2 July 2014) is publicly available.
June 2014:
Other wheat species WGS assemblies are publicly available for BLAST : Triticum durum, cv. Cappelli, Triticum durum, cv. Strongfield, Triticum monococcum, Aegilops speltoides, Aegilops sharonensis,Triticum urartu, Aegilops tauschii.
April 2014:
- Access Status webpage is available to display all the resources and their access (public, community, etc.).
- 3B reference sequence databanks (whole chromosome and CDS only) are available to BLAST .
March 2014:
- Public BLAST to query survey sequence and 454 assemblies is available .
- 3B data (Genomic DNA, CDSs, annotation of features and a README) are publicly available for download .
- POPSEQ data are publicly available for download .
- GenomeZipper data are now publicly available.
- New oriented RNA-Seq library is publicly available.
Feb 2014:
- Genome Zipper v5 is available for coordinating committee members.
- Diploid wheat species WGS assemblies are publicly available for download
Jan 2014:
- Survey sequence assemblies and Gene models download are publicly available.
- 3B annotated pseudomolecule is publicly available.
- 2D physical map (WGP data) is publicly available to download .
- 3B RNA-Seq data (15 conditions) are publicly available to download .
Dec 2013:
- New Gene models version is available for coordinating committee members.
Oct 2013:
- 7B physical map data (Odd-Arne Olsen) are available upon request though an MTA.
Sept 2013:
- Chromosomes assemblies are now available for download to "Blast agreement" members.
- Other wheat species WGS assemblies (TGAC) download are available to IWGSC coordinating committee members.
Jul 2013:
- RNA-Seq data from INRA GDEC (E. Paux) are available to coordinating committee members.
- 1AS sequence model (T. Wicker) is available for download.
Jun 2013:
- Genome Zipper v4.2 is available for coordinating committee members with new version of the 3D, 5D, 6D, 7D and 6BL zipper chromosomes.
May 2013:
- New assemblies available for download: 4AL v2 and 4DL v3 .
- These assemblies are available for BLAST.
Apr 2013:
- Genome Zipper v4 is available for coordinating committee members.
Feb 2013:
- Gene models are available for coordinating committee members.
Jan 2013:
- Genome Zipper v3 is available for coordinating committee members.
- The BLAST demo video is now available.