How to transfert your manually curated genes ?
   
 

CONTACTS

• Questions about gene annotation and recipients of the file: Hélène Rimbert , Frédéric Choulet .

• Questions about the browser and the website: Michael Alaux , Nicolas Francillonne . 

GUIDELINES

• The manually curated genes must be transfered in GFF3 format following The Sequence Ontology specifications. See description here .

• Please make sure your GFF3 file contains at least gene/mRNA/exon/CDS features with uniq ID and Parent attributes. The only case where an ID is not necessary concerns CDS & CDS features if they have Parent attribute defined.

• All attributes and feature types are case sensitive! i.e. Id is not the same as ID.

• Please make sure the chromosome names you are using are the same as the official release IWGSC RefSeq v1 annotations and sequences.

• Please, be as precise and complete as possible. Every feature which is not described in your annotation compared to the previous one will be lost.

• Once transfered, your file will be validated and added to the browser in the next release.

DOWNLOAD

  example_of_minimal_gff3.txt (1.90 kB)