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Chado Controller: advanced annotation management with a community annotation system
2012
International,
ACL (papers with reading comittee)
Bioinformatics (2012) Apr 1;28(7):1054-6
01 Apr 2012 Chado Controller: advanced annotation management with a community annotation systemGuignon V, Droc G, Alaux M, Baurens FC, Garsmeur O, Poiron C, Carver T, Rouard M, Bocs S.
We developed a controller that is compliant with the Chado database schema, GBrowse and genome annotation-editing tools such as Artemis and Apollo. It enables the management of public and private data, monitors manual annotation (with controlled vocabularies, structural and functional annotation controls) and stores versions of annotation for all modified features. The Chado controller uses PostgreSQL and Perl.
Creation date: 15 Feb 2013
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Publication supervisor: A-F. Adam-Blondon
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eZ PublishPublication supervisor: A-F. Adam-Blondon
Read Credits & General Terms of Use